Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.79■□□□□ 0.76
Ubr1O70481 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Gm6888-201ENSMUST00000221983 706 ntBASIC19.79■□□□□ 0.76
Ubr1O70481 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.79■□□□□ 0.76
Ubr1O70481 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubr1O70481 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Gm8410-201ENSMUST00000117225 605 ntBASIC19.78■□□□□ 0.76
Ubr1O70481 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.78■□□□□ 0.76
Ubr1O70481 Gm9719-201ENSMUST00000162765 543 ntBASIC19.78■□□□□ 0.76
Ubr1O70481 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.78■□□□□ 0.76
Ubr1O70481 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ubr1O70481 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.78■□□□□ 0.76
Ubr1O70481 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ubr1O70481 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Ubr1O70481 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ubr1O70481 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr1O70481 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.78■□□□□ 0.76
Ubr1O70481 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.77■□□□□ 0.76
Ubr1O70481 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr1O70481 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ubr1O70481 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ubr1O70481 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr1O70481 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr1O70481 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr1O70481 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Ubr1O70481 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ubr1O70481 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.77■□□□□ 0.76
Ubr1O70481 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.77■□□□□ 0.76
Ubr1O70481 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr1O70481 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ubr1O70481 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ubr1O70481 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ubr1O70481 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.77■□□□□ 0.75
Ubr1O70481 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.76■□□□□ 0.75
Ubr1O70481 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.76■□□□□ 0.75
Ubr1O70481 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ubr1O70481 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.76■□□□□ 0.75
Ubr1O70481 Gm14767-201ENSMUST00000121559 586 ntBASIC19.76■□□□□ 0.75
Ubr1O70481 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.76■□□□□ 0.75
Ubr1O70481 Gm43703-201ENSMUST00000200523 763 ntBASIC19.76■□□□□ 0.75
Ubr1O70481 Gm7730-201ENSMUST00000212486 454 ntBASIC19.76■□□□□ 0.75
Ubr1O70481 Dupd1-202ENSMUST00000224735 548 ntBASIC19.76■□□□□ 0.75
Ubr1O70481 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr1O70481 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.75■□□□□ 0.75
Ubr1O70481 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.75■□□□□ 0.75
Ubr1O70481 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ubr1O70481 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Gm11424-201ENSMUST00000121929 829 ntBASIC19.75■□□□□ 0.75
Ubr1O70481 Gm15487-201ENSMUST00000122373 465 ntBASIC19.75■□□□□ 0.75
Ubr1O70481 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.75■□□□□ 0.75
Ubr1O70481 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ubr1O70481 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.75■□□□□ 0.75
Ubr1O70481 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.75■□□□□ 0.75
Ubr1O70481 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr1O70481 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.75■□□□□ 0.75
Ubr1O70481 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms