Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.29■□□□□ 0.2
Pja1O55176 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Pja1O55176 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.29■□□□□ 0.2
Pja1O55176 Olfr129-201ENSMUST00000122318 993 ntBASIC16.29■□□□□ 0.2
Pja1O55176 Gm25016-201ENSMUST00000158399 131 ntBASIC16.29■□□□□ 0.2
Pja1O55176 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.29■□□□□ 0.2
Pja1O55176 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.29■□□□□ 0.2
Pja1O55176 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pja1O55176 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pja1O55176 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pja1O55176 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Gm44454-201ENSMUST00000198541 138 ntBASIC16.28■□□□□ 0.2
Pja1O55176 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.28■□□□□ 0.2
Pja1O55176 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pja1O55176 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pja1O55176 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.28■□□□□ 0.2
Pja1O55176 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pja1O55176 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.27■□□□□ 0.2
Pja1O55176 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pja1O55176 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.27■□□□□ 0.2
Pja1O55176 Rprl3-201ENSMUST00000157400 290 ntBASIC16.27■□□□□ 0.2
Pja1O55176 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pja1O55176 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.27■□□□□ 0.2
Pja1O55176 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pja1O55176 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pja1O55176 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pja1O55176 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pja1O55176 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pja1O55176 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pja1O55176 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pja1O55176 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pja1O55176 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.27■□□□□ 0.19
Pja1O55176 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pja1O55176 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pja1O55176 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.26■□□□□ 0.19
Pja1O55176 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pja1O55176 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.26■□□□□ 0.19
Pja1O55176 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.26■□□□□ 0.19
Pja1O55176 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pja1O55176 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms