Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Gm10849-201ENSMUST00000100397 618 ntBASIC12.2□□□□□ -0.46
Pde6dO55057 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.2□□□□□ -0.46
Pde6dO55057 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Pde6dO55057 Gm29707-201ENSMUST00000196325 491 ntBASIC12.2□□□□□ -0.46
Pde6dO55057 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.2□□□□□ -0.46
Pde6dO55057 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pde6dO55057 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pde6dO55057 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.2□□□□□ -0.46
Pde6dO55057 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Efs-202ENSMUST00000227037 2540 ntBASIC12.19□□□□□ -0.46
Pde6dO55057 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.19□□□□□ -0.46
Pde6dO55057 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pde6dO55057 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.19□□□□□ -0.46
Pde6dO55057 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pde6dO55057 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pde6dO55057 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.19□□□□□ -0.46
Pde6dO55057 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pde6dO55057 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Pde6dO55057 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pde6dO55057 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.19□□□□□ -0.46
Pde6dO55057 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pde6dO55057 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pde6dO55057 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.18□□□□□ -0.46
Pde6dO55057 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pde6dO55057 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pde6dO55057 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pde6dO55057 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pde6dO55057 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.18□□□□□ -0.46
Pde6dO55057 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pde6dO55057 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.17□□□□□ -0.46
Pde6dO55057 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.17□□□□□ -0.46
Pde6dO55057 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pde6dO55057 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pde6dO55057 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.17□□□□□ -0.46
Pde6dO55057 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms