Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.78□□□□□ -0.36
SncaO55042 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SncaO55042 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.78□□□□□ -0.36
SncaO55042 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SncaO55042 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SncaO55042 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SncaO55042 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
SncaO55042 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SncaO55042 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.77□□□□□ -0.37
SncaO55042 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.77□□□□□ -0.37
SncaO55042 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.77□□□□□ -0.37
SncaO55042 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SncaO55042 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.77□□□□□ -0.37
SncaO55042 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SncaO55042 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SncaO55042 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.77□□□□□ -0.37
SncaO55042 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SncaO55042 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SncaO55042 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.76□□□□□ -0.37
SncaO55042 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gm5587-201ENSMUST00000206270 674 ntBASIC12.76□□□□□ -0.37
SncaO55042 Gm10252-201ENSMUST00000209541 832 ntBASIC12.76□□□□□ -0.37
SncaO55042 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SncaO55042 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.76□□□□□ -0.37
SncaO55042 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SncaO55042 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms