Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Matn3O35701 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Matn3O35701 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Matn3O35701 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Matn3O35701 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Matn3O35701 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.05□□□□□ -0.16
Matn3O35701 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Matn3O35701 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Matn3O35701 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Matn3O35701 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Matn3O35701 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.05□□□□□ -0.16
Matn3O35701 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Matn3O35701 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.04□□□□□ -0.16
Matn3O35701 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Matn3O35701 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Matn3O35701 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Gm43799-201ENSMUST00000201845 579 ntBASIC14.04□□□□□ -0.16
Matn3O35701 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Matn3O35701 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Matn3O35701 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Matn3O35701 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Matn3O35701 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.04□□□□□ -0.16
Matn3O35701 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Matn3O35701 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
Matn3O35701 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Matn3O35701 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.03□□□□□ -0.16
Matn3O35701 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.03□□□□□ -0.16
Matn3O35701 Odf3b-204ENSMUST00000227834 930 ntBASIC14.03□□□□□ -0.16
Matn3O35701 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Matn3O35701 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Matn3O35701 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Matn3O35701 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Matn3O35701 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms