Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.23□□□□□ -0.45
Efnb3O35393 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.23□□□□□ -0.45
Efnb3O35393 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.23□□□□□ -0.45
Efnb3O35393 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Efnb3O35393 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.22□□□□□ -0.45
Efnb3O35393 Gm10013-201ENSMUST00000106074 672 ntBASIC12.22□□□□□ -0.45
Efnb3O35393 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Mir6404-201ENSMUST00000183699 94 ntBASIC12.22□□□□□ -0.45
Efnb3O35393 Gm44430-201ENSMUST00000203376 995 ntBASIC12.22□□□□□ -0.45
Efnb3O35393 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.22□□□□□ -0.45
Efnb3O35393 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.22□□□□□ -0.45
Efnb3O35393 Gm18101-201ENSMUST00000215769 548 ntBASIC12.22□□□□□ -0.45
Efnb3O35393 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.22□□□□□ -0.45
Efnb3O35393 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.22□□□□□ -0.45
Efnb3O35393 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Efnb3O35393 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Efnb3O35393 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Efnb3O35393 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.21□□□□□ -0.45
Efnb3O35393 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Efnb3O35393 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.21□□□□□ -0.45
Efnb3O35393 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.21□□□□□ -0.45
Efnb3O35393 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.21□□□□□ -0.45
Efnb3O35393 Gm27389-201ENSMUST00000183622 195 ntBASIC12.21□□□□□ -0.45
Efnb3O35393 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Efnb3O35393 Gm18032-201ENSMUST00000222541 538 ntBASIC12.21□□□□□ -0.45
Efnb3O35393 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.21□□□□□ -0.45
Efnb3O35393 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Efnb3O35393 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Efnb3O35393 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.21□□□□□ -0.46
Efnb3O35393 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.21□□□□□ -0.46
Efnb3O35393 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Efnb3O35393 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.21□□□□□ -0.46
Efnb3O35393 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Efnb3O35393 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Efnb3O35393 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Efnb3O35393 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.21□□□□□ -0.46
Efnb3O35393 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Efnb3O35393 Efs-202ENSMUST00000227037 2540 ntBASIC12.2□□□□□ -0.46
Efnb3O35393 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.2□□□□□ -0.46
Efnb3O35393 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Efnb3O35393 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Efnb3O35393 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.2□□□□□ -0.46
Efnb3O35393 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.2□□□□□ -0.46
Efnb3O35393 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms