Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Gm7889-201ENSMUST00000185591 958 ntBASIC14.09□□□□□ -0.15
Shisa8J3QNX5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shisa8J3QNX5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.08□□□□□ -0.16
Shisa8J3QNX5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Gm22240-201ENSMUST00000175225 82 ntBASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shisa8J3QNX5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Shisa8J3QNX5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms