Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh1F7BJK1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh1F7BJK1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Pcdh1F7BJK1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Pcdh1F7BJK1 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm12134-201ENSMUST00000122109 520 ntBASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm10231-201ENSMUST00000181584 441 ntBASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm10175-202ENSMUST00000208752 441 ntBASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh1F7BJK1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh1F7BJK1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms