Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28043E0CXC2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Gm28043E0CXC2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.49■□□□□ 0.07
Gm28043E0CXC2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28043E0CXC2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28043E0CXC2 Gm7284-201ENSMUST00000131667 944 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms