Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gm27437-201ENSMUST00000183429 107 ntBASIC13.81□□□□□ -0.2
Shank1D3YZU1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Gm15693-201ENSMUST00000120470 637 ntBASIC13.8□□□□□ -0.2
Shank1D3YZU1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shank1D3YZU1 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.79□□□□□ -0.2
Shank1D3YZU1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Gm27306-201ENSMUST00000183970 107 ntBASIC13.79□□□□□ -0.2
Shank1D3YZU1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.79□□□□□ -0.2
Shank1D3YZU1 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.79□□□□□ -0.2
Shank1D3YZU1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.79□□□□□ -0.2
Shank1D3YZU1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shank1D3YZU1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Gm16198-201ENSMUST00000118766 670 ntBASIC13.78□□□□□ -0.2
Shank1D3YZU1 Gm13823-201ENSMUST00000119930 345 ntBASIC13.78□□□□□ -0.2
Shank1D3YZU1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Gm7730-201ENSMUST00000212486 454 ntBASIC13.78□□□□□ -0.2
Shank1D3YZU1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.78□□□□□ -0.2
Shank1D3YZU1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Shank1D3YZU1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms