Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm12887B1AVM1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.49□□□□□ -0.41
Gm12887B1AVM1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Gm7213-201ENSMUST00000215977 950 ntBASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm12887B1AVM1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm12887B1AVM1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms