Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.38□□□□□ -0.11
IsxA1A546 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
IsxA1A546 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IsxA1A546 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
IsxA1A546 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.37□□□□□ -0.11
IsxA1A546 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IsxA1A546 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
IsxA1A546 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.37□□□□□ -0.11
IsxA1A546 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Gm18115-201ENSMUST00000221209 621 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Odf3b-204ENSMUST00000227834 930 ntBASIC14.37□□□□□ -0.11
IsxA1A546 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IsxA1A546 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IsxA1A546 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IsxA1A546 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
IsxA1A546 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Gm18421-201ENSMUST00000204122 625 ntBASIC14.36□□□□□ -0.11
IsxA1A546 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.36□□□□□ -0.11
IsxA1A546 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.36□□□□□ -0.11
IsxA1A546 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.36□□□□□ -0.11
IsxA1A546 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.36□□□□□ -0.11
IsxA1A546 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
IsxA1A546 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IsxA1A546 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
IsxA1A546 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.35□□□□□ -0.11
IsxA1A546 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.35□□□□□ -0.11
IsxA1A546 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
IsxA1A546 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.35□□□□□ -0.11
IsxA1A546 Gm21814-202ENSMUST00000203277 873 ntBASIC14.35□□□□□ -0.11
IsxA1A546 Gm30025-201ENSMUST00000218555 728 ntBASIC14.35□□□□□ -0.11
IsxA1A546 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.35□□□□□ -0.11
IsxA1A546 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
IsxA1A546 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms