Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm9013-201ENSMUST00000132939 882 ntBASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Gm18032-201ENSMUST00000222541 538 ntBASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.41□□□□□ -0.42
Trav12d-1A0N8R0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Gm6623-201ENSMUST00000173570 544 ntBASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms