Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm27463-201ENSMUST00000183569 57 ntBASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Trav9d-4A0A0G2JG37 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm29257-201ENSMUST00000186115 639 ntBASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms