Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbc1A0A0A6YWV4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbc1A0A0A6YWV4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbc1A0A0A6YWV4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms