Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm10052-201ENSMUST00000168019 960 ntBASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm7729-201ENSMUST00000050143 801 ntBASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16nA0A075B634 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Gm10653-202ENSMUST00000139570 835 ntBASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav16nA0A075B634 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Gm44430-201ENSMUST00000203376 995 ntBASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav16nA0A075B634 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms