Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav10nA0A075B622 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Gm34391-201ENSMUST00000203706 907 ntBASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav10nA0A075B622 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trav10nA0A075B622 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Gm24589-201ENSMUST00000116692 94 ntBASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Gm19164-201ENSMUST00000210667 640 ntBASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav10nA0A075B622 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Gm8344-201ENSMUST00000119813 856 ntBASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Birc2-201ENSMUST00000054878 378 ntBASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav10nA0A075B622 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav10nA0A075B622 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms