Protein–RNA interactions for Protein: Q9Z2V9

Ccni, Cyclin-I, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcniQ9Z2V9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcniQ9Z2V9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CcniQ9Z2V9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcniQ9Z2V9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.13□□□□□ -0.15
CcniQ9Z2V9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Il3ra-202ENSMUST00000223589 738 ntBASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcniQ9Z2V9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcniQ9Z2V9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcniQ9Z2V9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms