Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Skp2Q9Z0Z3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Skp2Q9Z0Z3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Skp2Q9Z0Z3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Skp2Q9Z0Z3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Skp2Q9Z0Z3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Gm11950-201ENSMUST00000121615 838 ntBASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Skp2Q9Z0Z3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Skp2Q9Z0Z3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Skp2Q9Z0Z3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Skp2Q9Z0Z3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms