Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1h3Q9Z0Y9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nr1h3Q9Z0Y9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1h3Q9Z0Y9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1h3Q9Z0Y9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm15920-201ENSMUST00000118998 402 ntBASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr1h3Q9Z0Y9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr1h3Q9Z0Y9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms