Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf13bQ9ET35 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf13bQ9ET35 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.15□□□□□ -0.47
Tnfrsf13bQ9ET35 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfrsf13bQ9ET35 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfrsf13bQ9ET35 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Mir770-201ENSMUST00000103252 94 ntBASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm12134-201ENSMUST00000122109 520 ntBASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm22697-201ENSMUST00000175194 63 ntBASIC12.14□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm43799-201ENSMUST00000201845 579 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms