Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gm27321-201ENSMUST00000185021 205 ntBASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rrp8Q9DB85 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rrp8Q9DB85 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rrp8Q9DB85 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rrp8Q9DB85 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rrp8Q9DB85 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rrp8Q9DB85 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rrp8Q9DB85 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Rpph1-201ENSMUST00000175096 319 ntBASIC15.08■□□□□ 0
Rrp8Q9DB85 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Gm20553-201ENSMUST00000204205 844 ntBASIC15.08■□□□□ 0
Rrp8Q9DB85 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.08■□□□□ 0
Rrp8Q9DB85 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rrp8Q9DB85 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rrp8Q9DB85 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rrp8Q9DB85 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.08■□□□□ 0
Rrp8Q9DB85 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rrp8Q9DB85 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.08■□□□□ 0
Rrp8Q9DB85 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.07■□□□□ 0
Rrp8Q9DB85 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm8318-201ENSMUST00000182954 872 ntBASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm27430-201ENSMUST00000184585 107 ntBASIC15.07■□□□□ 0
Rrp8Q9DB85 Mir7023-201ENSMUST00000185093 64 ntBASIC15.07■□□□□ 0
Rrp8Q9DB85 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm44333-201ENSMUST00000197168 107 ntBASIC15.07■□□□□ 0
Rrp8Q9DB85 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rrp8Q9DB85 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rrp8Q9DB85 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.06■□□□□ 0
Rrp8Q9DB85 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms