Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Llcfc1Q9D9P8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Llcfc1Q9D9P8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 AA414768-201ENSMUST00000121924 1257 ntBASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Olfr129-201ENSMUST00000122318 993 ntBASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Llcfc1Q9D9P8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Llcfc1Q9D9P8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Gm6659-201ENSMUST00000174752 547 ntBASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.26■□□□□ 0.19
Llcfc1Q9D9P8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms