Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Gm9103-201ENSMUST00000119371 405 ntBASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Birc2-201ENSMUST00000054878 378 ntBASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp4bQ9D8B3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm4535-201ENSMUST00000182274 558 ntBASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gm10355-201ENSMUST00000097146 517 ntBASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp4bQ9D8B3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4bQ9D8B3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chmp4bQ9D8B3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms