Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Gm12497-201ENSMUST00000138778 237 ntBASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Gm43514-201ENSMUST00000198852 424 ntBASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sft2d3Q9CSV6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Gm9172-201ENSMUST00000212092 954 ntBASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sft2d3Q9CSV6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Gm2651-201ENSMUST00000203560 838 ntBASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sft2d3Q9CSV6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.15□□□□□ -0.31
Sft2d3Q9CSV6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sft2d3Q9CSV6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sft2d3Q9CSV6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sft2d3Q9CSV6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms