Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTRAFQ9CQE8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Gm36967-201ENSMUST00000193814 266 ntBASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTRAFQ9CQE8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RTRAFQ9CQE8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gm12085-201ENSMUST00000119263 940 ntBASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gm27275-201ENSMUST00000184318 272 ntBASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms