Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ska1Q9CPV1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ska1Q9CPV1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Mir770-201ENSMUST00000103252 94 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ska1Q9CPV1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms