Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.1□□□□□ -0.15
Lims1Q99JW4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.1□□□□□ -0.15
Lims1Q99JW4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.09□□□□□ -0.15
Lims1Q99JW4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.09□□□□□ -0.15
Lims1Q99JW4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.09□□□□□ -0.15
Lims1Q99JW4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.09□□□□□ -0.15
Lims1Q99JW4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.09□□□□□ -0.15
Lims1Q99JW4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lims1Q99JW4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.08□□□□□ -0.15
Lims1Q99JW4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lims1Q99JW4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lims1Q99JW4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lims1Q99JW4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Mir3081-201ENSMUST00000175305 84 ntBASIC14.08□□□□□ -0.16
Lims1Q99JW4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lims1Q99JW4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.07□□□□□ -0.16
Lims1Q99JW4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.07□□□□□ -0.16
Lims1Q99JW4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.07□□□□□ -0.16
Lims1Q99JW4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.07□□□□□ -0.16
Lims1Q99JW4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lims1Q99JW4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms