Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1aQ921W0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.66□□□□□ -0.22
Chmp1aQ921W0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Gm26039-201ENSMUST00000158152 144 ntBASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1aQ921W0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp1aQ921W0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1aQ921W0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms