Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm44872-201ENSMUST00000207864 420 ntBASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhgb5Q91XX5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Gm45747-201ENSMUST00000212203 999 ntBASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgb5Q91XX5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Gm12008-201ENSMUST00000117791 755 ntBASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Gm8318-201ENSMUST00000182954 872 ntBASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Gm45612-201ENSMUST00000211320 160 ntBASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgb5Q91XX5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgb5Q91XX5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgb5Q91XX5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgb5Q91XX5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgb5Q91XX5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms