Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm13829-201ENSMUST00000119600 138 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 Mir1938-201ENSMUST00000158746 100 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
StrcQ8VIM6 Gm15823-201ENSMUST00000064305 670 ntBASIC18.19■□□□□ 0.5
StrcQ8VIM6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Gm27631-201ENSMUST00000184163 466 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 Gm46209-201ENSMUST00000217912 553 ntBASIC18.18■□□□□ 0.5
StrcQ8VIM6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
StrcQ8VIM6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Mir6420-201ENSMUST00000185032 102 ntBASIC18.17■□□□□ 0.5
StrcQ8VIM6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
StrcQ8VIM6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.16■□□□□ 0.5
StrcQ8VIM6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
StrcQ8VIM6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Gm11918-201ENSMUST00000121660 179 ntBASIC18.15■□□□□ 0.5
StrcQ8VIM6 Gm17150-201ENSMUST00000165577 381 ntBASIC18.15■□□□□ 0.5
StrcQ8VIM6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.15■□□□□ 0.5
StrcQ8VIM6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.15■□□□□ 0.5
StrcQ8VIM6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
StrcQ8VIM6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
StrcQ8VIM6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
StrcQ8VIM6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
StrcQ8VIM6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
StrcQ8VIM6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.14■□□□□ 0.5
StrcQ8VIM6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.14■□□□□ 0.5
StrcQ8VIM6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
StrcQ8VIM6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.14■□□□□ 0.49
StrcQ8VIM6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Gm37917-201ENSMUST00000194711 392 ntBASIC18.14■□□□□ 0.49
StrcQ8VIM6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
StrcQ8VIM6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.13■□□□□ 0.49
StrcQ8VIM6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
StrcQ8VIM6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
StrcQ8VIM6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
StrcQ8VIM6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
StrcQ8VIM6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms