Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.4■□□□□ 0.22
TraipQ8VIG6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.4■□□□□ 0.22
TraipQ8VIG6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TraipQ8VIG6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Gm25925-201ENSMUST00000158314 306 ntBASIC16.39■□□□□ 0.21
TraipQ8VIG6 Rpph1-201ENSMUST00000175096 319 ntBASIC16.39■□□□□ 0.21
TraipQ8VIG6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.39■□□□□ 0.21
TraipQ8VIG6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TraipQ8VIG6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.39■□□□□ 0.21
TraipQ8VIG6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.38■□□□□ 0.21
TraipQ8VIG6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.38■□□□□ 0.21
TraipQ8VIG6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TraipQ8VIG6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.37■□□□□ 0.21
TraipQ8VIG6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.37■□□□□ 0.21
TraipQ8VIG6 Gm16198-201ENSMUST00000118766 670 ntBASIC16.37■□□□□ 0.21
TraipQ8VIG6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.37■□□□□ 0.21
TraipQ8VIG6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TraipQ8VIG6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.36■□□□□ 0.21
TraipQ8VIG6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms