Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Mir6404-201ENSMUST00000183699 94 ntBASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Gm5417-201ENSMUST00000079706 384 ntBASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab40cQ8VHQ4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rab40cQ8VHQ4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rab40cQ8VHQ4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm10566-201ENSMUST00000086739 996 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rab40cQ8VHQ4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Gm37055-201ENSMUST00000191866 133 ntBASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab40cQ8VHQ4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms