Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm11478-201ENSMUST00000117851 599 ntBASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm27680-201ENSMUST00000184192 160 ntBASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm28630-201ENSMUST00000187806 498 ntBASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm18062-201ENSMUST00000208020 547 ntBASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Gm18055-201ENSMUST00000208254 547 ntBASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lmcd1Q8VEE1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Gm18049-201ENSMUST00000208909 581 ntBASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lmcd1Q8VEE1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Gm12859-201ENSMUST00000117834 427 ntBASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mir1938-201ENSMUST00000158746 100 ntBASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lmcd1Q8VEE1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lmcd1Q8VEE1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lmcd1Q8VEE1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gm29541-201ENSMUST00000191351 678 ntBASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Gm7775-201ENSMUST00000218871 853 ntBASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.39■□□□□ 0.21
Lmcd1Q8VEE1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms