Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc9Q8VC31 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Gm12500-202ENSMUST00000186471 2428 ntBASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc9Q8VC31 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc9Q8VC31 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Mir6349-201ENSMUST00000184059 97 ntBASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Gm10138-203ENSMUST00000206952 366 ntBASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc9Q8VC31 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc9Q8VC31 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Gm11249-201ENSMUST00000117071 859 ntBASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Gm29257-201ENSMUST00000186115 639 ntBASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc9Q8VC31 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc9Q8VC31 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms