Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Mir5130-201ENSMUST00000175160 84 ntBASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Gm27011-201ENSMUST00000182352 972 ntBASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup35Q8R4R6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup35Q8R4R6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.61□□□□□ -0.39
Nup35Q8R4R6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup35Q8R4R6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms