Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf7Q8R0S1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Gm13418-201ENSMUST00000119097 944 ntBASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atf7Q8R0S1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Gm24589-201ENSMUST00000116692 94 ntBASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atf7Q8R0S1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Gm17971-201ENSMUST00000190239 806 ntBASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.22■□□□□ 0.51
Atf7Q8R0S1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atf7Q8R0S1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Atf7Q8R0S1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Atf7Q8R0S1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms