Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col23a1Q8K4G2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Mir1897-201ENSMUST00000122581 272 ntBASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col23a1Q8K4G2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Gm17150-201ENSMUST00000165577 381 ntBASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.6■□□□□ 0.57
Col23a1Q8K4G2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
Col23a1Q8K4G2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Col23a1Q8K4G2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.58■□□□□ 0.57
Col23a1Q8K4G2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col23a1Q8K4G2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col23a1Q8K4G2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col23a1Q8K4G2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Col23a1Q8K4G2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col23a1Q8K4G2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Gm37917-201ENSMUST00000194711 392 ntBASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Gm46209-201ENSMUST00000217912 553 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms