Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gm18737-201ENSMUST00000173594 937 ntBASIC17.43■□□□□ 0.38
Syne4Q8CII8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gm9824-201ENSMUST00000178707 561 ntBASIC17.43■□□□□ 0.38
Syne4Q8CII8 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.43■□□□□ 0.38
Syne4Q8CII8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gm38225-201ENSMUST00000194001 393 ntBASIC17.43■□□□□ 0.38
Syne4Q8CII8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gm2423-201ENSMUST00000074863 733 ntBASIC17.43■□□□□ 0.38
Syne4Q8CII8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syne4Q8CII8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Gm8410-201ENSMUST00000117225 605 ntBASIC17.42■□□□□ 0.38
Syne4Q8CII8 Gm13823-201ENSMUST00000119930 345 ntBASIC17.42■□□□□ 0.38
Syne4Q8CII8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syne4Q8CII8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Gm13453-201ENSMUST00000118708 357 ntBASIC17.41■□□□□ 0.38
Syne4Q8CII8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Syne4Q8CII8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.4■□□□□ 0.38
Syne4Q8CII8 Gm16026-204ENSMUST00000162652 683 ntBASIC17.4■□□□□ 0.38
Syne4Q8CII8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Gm6888-201ENSMUST00000221983 706 ntBASIC17.4■□□□□ 0.38
Syne4Q8CII8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syne4Q8CII8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms