Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Gm27494-201ENSMUST00000184735 189 ntBASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab11fip3Q8CHD8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rab11fip3Q8CHD8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab11fip3Q8CHD8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab11fip3Q8CHD8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab11fip3Q8CHD8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms