Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc5Q8CG46 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Grk6-207ENSMUST00000225925 2769 ntBASIC19.12■□□□□ 0.65
Smc5Q8CG46 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc5Q8CG46 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.11■□□□□ 0.65
Smc5Q8CG46 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Gm18622-201ENSMUST00000219361 595 ntBASIC19.11■□□□□ 0.65
Smc5Q8CG46 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.11■□□□□ 0.65
Smc5Q8CG46 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc5Q8CG46 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Gm23634-201ENSMUST00000175071 91 ntBASIC19.1■□□□□ 0.65
Smc5Q8CG46 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.1■□□□□ 0.65
Smc5Q8CG46 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.1■□□□□ 0.65
Smc5Q8CG46 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.1■□□□□ 0.65
Smc5Q8CG46 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Sybu-209ENSMUST00000228639 4113 ntBASIC19.1■□□□□ 0.65
Smc5Q8CG46 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc5Q8CG46 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc5Q8CG46 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms