Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps53Q8CCB4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Gm13418-201ENSMUST00000119097 944 ntBASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Gm6736-201ENSMUST00000166583 948 ntBASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Gm7506-201ENSMUST00000207758 815 ntBASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps53Q8CCB4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Gm27702-201ENSMUST00000184512 56 ntBASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps53Q8CCB4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Gm15173-201ENSMUST00000122049 433 ntBASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps53Q8CCB4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms