Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc46a2Q8CA03 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc46a2Q8CA03 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Gm27389-201ENSMUST00000183622 195 ntBASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc46a2Q8CA03 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a2Q8CA03 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a2Q8CA03 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a2Q8CA03 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a2Q8CA03 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a2Q8CA03 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms