Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Uba3Q8C878 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Uba3Q8C878 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.27■□□□□ 0.2
Uba3Q8C878 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.27■□□□□ 0.2
Uba3Q8C878 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.27■□□□□ 0.19
Uba3Q8C878 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Uba3Q8C878 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Uba3Q8C878 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Uba3Q8C878 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.26■□□□□ 0.19
Uba3Q8C878 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Gm2651-201ENSMUST00000203560 838 ntBASIC16.26■□□□□ 0.19
Uba3Q8C878 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.26■□□□□ 0.19
Uba3Q8C878 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.26■□□□□ 0.19
Uba3Q8C878 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.26■□□□□ 0.19
Uba3Q8C878 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Uba3Q8C878 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.25■□□□□ 0.19
Uba3Q8C878 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.25■□□□□ 0.19
Uba3Q8C878 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Gm15590-201ENSMUST00000078419 552 ntBASIC16.25■□□□□ 0.19
Uba3Q8C878 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Uba3Q8C878 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Uba3Q8C878 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.24■□□□□ 0.19
Uba3Q8C878 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Uba3Q8C878 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Uba3Q8C878 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Uba3Q8C878 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Uba3Q8C878 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Uba3Q8C878 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.24■□□□□ 0.19
Uba3Q8C878 AV026068-213ENSMUST00000223675 1171 ntBASIC16.24■□□□□ 0.19
Uba3Q8C878 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms