Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp44Q8C2S0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm2651-201ENSMUST00000203560 838 ntBASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp44Q8C2S0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp44Q8C2S0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.03■□□□□ 0.48
Usp44Q8C2S0 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp44Q8C2S0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.02■□□□□ 0.48
Usp44Q8C2S0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp44Q8C2S0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp44Q8C2S0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp44Q8C2S0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.02■□□□□ 0.47
Usp44Q8C2S0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms