Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tsen54Q8C2A2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tsen54Q8C2A2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tsen54Q8C2A2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Gm7370-201ENSMUST00000219471 767 ntBASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tsen54Q8C2A2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms