Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npas4Q8BGD7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Gm27622-201ENSMUST00000183779 60 ntBASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Npas4Q8BGD7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Npas4Q8BGD7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Npas4Q8BGD7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Npas4Q8BGD7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Npas4Q8BGD7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Npas4Q8BGD7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Gm5779-201ENSMUST00000218467 910 ntBASIC16.2■□□□□ 0.18
Npas4Q8BGD7 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Npas4Q8BGD7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Gm18737-201ENSMUST00000173594 937 ntBASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npas4Q8BGD7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.19■□□□□ 0.18
Npas4Q8BGD7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms