Protein–RNA interactions for Protein: Q8BG40

Katnb1, Katanin p80 WD40 repeat-containing subunit B1, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Katnb1Q8BG40 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Katnb1Q8BG40 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Katnb1Q8BG40 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Katnb1Q8BG40 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Katnb1Q8BG40 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Katnb1Q8BG40 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Katnb1Q8BG40 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Gm44454-201ENSMUST00000198541 138 ntBASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Katnb1Q8BG40 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Gm15372-201ENSMUST00000120729 834 ntBASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.21□□□□□ -0.13
Katnb1Q8BG40 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Katnb1Q8BG40 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Katnb1Q8BG40 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Katnb1Q8BG40 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Katnb1Q8BG40 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.21□□□□□ -0.14
Katnb1Q8BG40 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Katnb1Q8BG40 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.21□□□□□ -0.14
Katnb1Q8BG40 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Katnb1Q8BG40 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Katnb1Q8BG40 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Katnb1Q8BG40 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Katnb1Q8BG40 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms