Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim65Q8BFW4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim65Q8BFW4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim65Q8BFW4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Trim65Q8BFW4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Gm4535-201ENSMUST00000182274 558 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Gm10355-201ENSMUST00000097146 517 ntBASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim65Q8BFW4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 BC037039-201ENSMUST00000192003 2205 ntBASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Gm14722-201ENSMUST00000118943 689 ntBASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Gm15358-201ENSMUST00000119249 520 ntBASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim65Q8BFW4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm7153-201ENSMUST00000117092 455 ntBASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm13418-201ENSMUST00000119097 944 ntBASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim65Q8BFW4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.55■□□□□ 0.24
Trim65Q8BFW4 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Gm6296-201ENSMUST00000222599 943 ntBASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim65Q8BFW4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms