Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Gm18622-201ENSMUST00000219361 595 ntBASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf40bQ80W14 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Gm4899-201ENSMUST00000178708 719 ntBASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf40bQ80W14 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Mir7023-201ENSMUST00000185093 64 ntBASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Gm5312-201ENSMUST00000203728 547 ntBASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf40bQ80W14 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Prpf40bQ80W14 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms